PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00606.40
Common NameJCGZ_18491, LOC105641550
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family SAP
Protein Properties Length: 362aa    MW: 41034.2 Da    PI: 7.2683
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00606.40genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP634.71.7e-193136191454
            SAP  91 llwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstf 186
                    +lw+rltrriW rt+ll+dtWr+eyiyrhrtarnfrtr++s+++l+fdpadvd++nd+dal+Crclalsd +la+Gf+dGavrlfdl+tr h++tf
  Jcr4S00606.40   1 MLWRRLTRRIWGRTHLLHDTWRDEYIYRHRTARNFRTRTSSHFNLHFDPADVDDPNDPDALICRCLALSDYHLACGFSDGAVRLFDLRTRHHTRTF 96 
                    59********************************************************************************************** PP

            SAP 187 lpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfv 282
                    +pqhrdrlGrfsrav+Gi+i+++rlvfatldGdihva+i++  +a++rr+++Gdvv+dGalvdf+G+g+WwvGl+aGvpGrafhiWd++teel+fv
  Jcr4S00606.40  97 RPQHRDRLGRFSRAVTGIIITSTRLVFATLDGDIHVAIITS--NAPPRRVHYGDVVTDGALVDFTGRGQWWVGLHAGVPGRAFHIWDSNTEELTFV 190
                    ****************************************9..88*************************************************** PP

            SAP 283 GGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevc 378
                    GG ltdP++v+GWh+lteltelvGrvrvt+ e+avaCtslr ++fdlrnq v+l+eee rrG iv+++d++neay+ v++rG+a+vrrv++l+e+c
  Jcr4S00606.40 191 GGLLTDPDSVTGWHTLTELTELVGRVRVTSLESAVACTSLRRMAFDLRNQAVILHEEEYRRGNIVGCFDVWNEAYIEVNNRGTARVRRVDTLQEIC 286
                    ************************************************************************************************ PP

            SAP 379 rfrvrgaqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                    rf++r  qrg+lgC+nggyal++aggv+rvWeie++++yl s+ ++vgevnalv +drhva++s d+tih++dfga
  Jcr4S00606.40 287 RFNIR-PQRGMLGCINGGYALICAGGVIRVWEIERTGEYLDSFGDGVGEVNALVGNDRHVAAASGDATIHVWDFGA 361
                    *****.99*******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF509781.89E-1564161IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.109.2E-1366205IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509781.89E-15250358IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.109.2E-13300359IPR015943WD40/YVTN repeat-like-containing domain
PROSITE patternPS006780345359IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MLWRRLTRRI WGRTHLLHDT WRDEYIYRHR TARNFRTRTS SHFNLHFDPA DVDDPNDPDA  60
LICRCLALSD YHLACGFSDG AVRLFDLRTR HHTRTFRPQH RDRLGRFSRA VTGIIITSTR  120
LVFATLDGDI HVAIITSNAP PRRVHYGDVV TDGALVDFTG RGQWWVGLHA GVPGRAFHIW  180
DSNTEELTFV GGLLTDPDSV TGWHTLTELT ELVGRVRVTS LESAVACTSL RRMAFDLRNQ  240
AVILHEEEYR RGNIVGCFDV WNEAYIEVNN RGTARVRRVD TLQEICRFNI RPQRGMLGCI  300
NGGYALICAG GVIRVWEIER TGEYLDSFGD GVGEVNALVG NDRHVAAASG DATIHVWDFG  360
AE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012081526.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-157SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A067K1B30.0A0A067K1B3_JATCU; Uncharacterized protein
STRINGcassava4.1_024963m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-151SAP family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  2. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]