PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00401.110
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family WRKY
Protein Properties Length: 179aa    MW: 20233.9 Da    PI: 11.0431
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00401.110genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.73e-10159179222
                     --SS-EEEEEEE--TT-SS-E CS
            WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                     +D ++WrKYGqK++kgs++pr
  Jcr4S00401.110 159 SDVWAWRKYGQKPIKGSPYPR 179
                     79******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-8152179IPR003657WRKY domain
PROSITE profilePS5081114.194153179IPR003657WRKY domain
SuperFamilySSF1182903.4E-7156179IPR003657WRKY domain
PfamPF031061.4E-5160179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MTGISKLWLG VAPPPLPLPL PLPLPPLLPP PQQTLLIPLT VEKIFIILSL LQVKRLQLAL  60
FSLFQIHLKR EMLSESCMTF YKPFFPKSHF TLYSPQSAPI SSLSSFGVSN SKEQTHLKQQ  120
QQPKQSVTSS ANNSHTPRSK RRKNQLKKIC QVPAEALSSD VWAWRKYGQK PIKGSPYPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852990.0KC485299.1 Jatropha curcas WRKY transcription factor 47 (WRKY47) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012083306.17e-64WRKY transcription factor 22
TrEMBLS5CKC42e-62S5CKC4_JATCU; WRKY transcription factor 47
STRINGcassava4.1_027012m1e-39(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2578322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.16e-23WRKY family protein