PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00263.60
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 443aa    MW: 49713.7 Da    PI: 7.3683
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00263.60genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.4e-16245293254
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                    +  GVr++k +g+W+AeIr p++   + r +lg++ t eeAa+a++a +k++ 
  Jcr4S00263.60 245 KPVGVRQRK-WGKWAAEIRNPVT---KVRTWLGTYNTLEEAAQAYEAKKKEYD 293
                    789*****9.**********654...5***********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.42E-18244287No hitNo description
PfamPF008477.4E-11245294IPR001471AP2/ERF domain
SMARTSM003801.7E-12245305IPR001471AP2/ERF domain
PROSITE profilePS5103217.293245302IPR001471AP2/ERF domain
PRINTSPR003673.1E-6246257IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-14247292IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-18248289IPR001471AP2/ERF domain
PRINTSPR003673.1E-6268284IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MPRFDRLEKG EWHRIKERGR AWKRKEEGGD RESRSEVREK RKTQRSDLAV IGALSKLYHF  60
SSALSVCCFS FGALCCGVFS YYMLLCCSQQ RLNLGFTAVS MRLRPKRTRS GVECFGAMPE  120
PRKRTLNQTR KATDAKSVSP EELEMEPKMR KIRVICHDPY ATDSDSSDDE SNGRNVRSFK  180
SKRFVTEINL PFVVFPQSKA SPEPESSCQD SNNSAKTPSK KRRVLSKTPT STTTLTPATK  240
PTVKKPVGVR QRKWGKWAAE IRNPVTKVRT WLGTYNTLEE AAQAYEAKKK EYDAMTMTTA  300
ASEKSQNVSS SMAVCQSQNI NKNNKNSPSP VSSDDTGSIL SHTSPSSVLE LDASAVSNVN  360
GDSSDLFKEE DLDLGLEFGN LIDDFGQLYD DYCGIEDLDI CGLDSDEPSA LPDYDFDFGN  420
EEFAYLDDHH HQQHQLPLNI ACP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012082084.10.0ethylene-responsive transcription factor ERF119
RefseqXP_020538111.10.0ethylene-responsive transcription factor ERF119
TrEMBLA0A067JZJ60.0A0A067JZJ6_JATCU; Uncharacterized protein
STRINGcassava4.1_010512m1e-155(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.24e-35ERF family protein