PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc017881.1_g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 196aa MW: 22327.1 Da PI: 7.5024 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.5 | 8.8e-09 | 3 | 79 | 58 | 128 |
NAM 58 wyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkge.....ktdWvmheyrl 128 y+F++ +k + g+r r + ++g+Wk + +++ + +++++g k+L + k++++kg +W+m+ey+l Itr_sc017881.1_g00001.1 3 RYYFTELTRKCQGGSRFLRrVGDRGTWKGQDAGHPIRV-RDKVMGFTKSLKYEmKKSKNKGGlgdrpGESWLMKEYSL 79 59**************9886888**************9.8899*********953344444344444689******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.094 | 1 | 102 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.48E-14 | 3 | 101 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-4 | 4 | 79 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MTRYYFTELT RKCQGGSRFL RRVGDRGTWK GQDAGHPIRV RDKVMGFTKS LKYEMKKSKN 60 KGGLGDRPGE SWLMKEYSLS DDYLRDKHVV LKDVVLCRIR RRVVRSTSRS SEPSTLNINE 120 NDTPLEIYNW PEKDDVTVSL PPSQTPTLAA VAAEVSSGVD DAYGGVIVTD NHTLQVDEFN 180 ELDELLRRLE NDDVTL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019163553.1 | 3e-79 | PREDICTED: NAC domain-containing protein 78-like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-06 | NAC domain containing protein 2 |