PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc002075.1_g00003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 205aa MW: 24633.9 Da PI: 5.0802 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67.8 | 3e-21 | 22 | 144 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkat 86 G F Pt+ +l++e+Lkkk+ +++l+ e+ike+ +y++ P+ Lp k+k ++ e y+F+++ +k ++g+ + +g Wk+ Itr_sc002075.1_g00003.1 22 GQYFCPTEYDLIDEFLKKKIGRRPLPN-EIIKEIpFLYEYLPELLPiWKFKYARNyEAYYFTHKGRKPPNGEFLGGKKFDGEWKTE 106 889*********************999.89****889*********645555444499*************998888889****** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g +++ + +++ g k+ L fy r++k +t Wv++eyr Itr_sc002075.1_g00003.1 107 GPEEACFGDENQILGYKRKLYFY--RSEK--RTGWVIKEYRY 144 ********999************..4444..89*******96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.639 | 19 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.37E-21 | 20 | 170 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.9E-12 | 22 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MDELEAFERD YEPGMGIETI GGQYFCPTEY DLIDEFLKKK IGRRPLPNEI IKEIPFLYEY 60 LPELLPIWKF KYARNYEAYY FTHKGRKPPN GEFLGGKKFD GEWKTEGPEE ACFGDENQIL 120 GYKRKLYFYR SEKRTGWVIK EYRYNPKRVP AHYLQNRLFH DFLLNYVVLR IKFDPNLREN 180 FTAEESFSIS MDDAKDLDVF QDFEG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019161644.1 | 1e-118 | PREDICTED: NAC domain-containing protein 76-like isoform X2 | ||||
Refseq | XP_019161645.1 | 1e-118 | PREDICTED: NAC domain-containing protein 76-like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 5e-13 | vascular related NAC-domain protein 1 |