PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc001700.1_g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 233aa MW: 27151.7 Da PI: 9.1029 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 48.5 | 2.8e-15 | 8 | 123 | 2 | 106 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWk 84 p G+ F+Ptd el+ yL++ v+gk++ + i e+d+y+ eP+++ k +++ek +y F++ +++++++r r+++ +g+Wk Itr_sc001700.1_g00010.1 8 PDGYIFRPTDTELL-SYLAQYVTGKSVLSTVPIVEIDLYNGeEPSEIFK--RSREKVMYIFTTLIRRSSSDSRYIRTIRggKGTWK 90 78************.9**********777456******98659****63..4577899******************87766899** PP NAM 85 atgkdkevlsk.......kgel......vglkktL 106 a+ + k+++++ + + +g k++L Itr_sc001700.1_g00010.1 91 AQDRGKPIYRRygnddhdD--NqqlrqlIGYKRSL 123 **********976655441..13344557777666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.67E-13 | 5 | 123 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 14.501 | 7 | 189 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.7E-7 | 8 | 124 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MERQEHIPDG YIFRPTDTEL LSYLAQYVTG KSVLSTVPIV EIDLYNGEEP SEIFKRSREK 60 VMYIFTTLIR RSSSDSRYIR TIRGGKGTWK AQDRGKPIYR RYGNDDHDDN QQLRQLIGYK 120 RSLSCVEIVS SVWNYSCVEL ILQLKENGSR FIRLCVDHDP HNNDCRFNPS YRLRHRPLND 180 TVLCRIKRKQ NNRDIMGFES GSIEEARNIG DIIGKLRKST TSSEVNSLLE TSH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019193824.1 | 7e-86 | PREDICTED: NAC domain-containing protein 101-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 1e-06 | NAC-domain protein 101 |