PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000376.1_g00008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 25011.7 Da PI: 10.6486 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.7 | 1.6e-10 | 105 | 161 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ rr+++NRe+ArrsR RK++ +e+L++ v L N++L ++ + ++ ++s Itr_sc000376.1_g00008.1 105 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRLGNRELLNRFRFVSHHCHLVQS 161 5789***********************************999887777777765555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.3E-13 | 101 | 165 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-8 | 101 | 149 | No hit | No description |
PROSITE profile | PS50217 | 9.921 | 103 | 148 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.3E-8 | 105 | 156 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.64E-11 | 105 | 156 | No hit | No description |
CDD | cd14702 | 2.61E-18 | 106 | 157 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 108 | 123 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MSFDPFFSNP LPPFEGGFTS WDIPESAFDD FPAQLDQQPV LSPLQEPVIS NSGSESDNSN 60 SNQNPVNSNS GSDEPSRKRT RPVSESGMDE PDPNQAVSLP AVDERKRRRM ISNRESARRS 120 RMRKQKHLEN LRNQVNRLRL GNRELLNRFR FVSHHCHLVQ SDNERLRAES SLLRQRLWDI 180 RQVLLVRQLQ HQLSTSAWGF NNNNNVEQRL QSLITR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 108 | RKRRR |
2 | 104 | 125 | RKRRRMISNRESARRSRMRKQK |
3 | 117 | 124 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019173283.1 | 1e-114 | PREDICTED: bZIP transcription factor 11-like | ||||
TrEMBL | A0A068U4U6 | 2e-60 | A0A068U4U6_COFCA; Uncharacterized protein | ||||
STRING | XP_009589486.1 | 1e-57 | (Nicotiana tomentosiformis) | ||||
STRING | XP_010106904.1 | 7e-58 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37730.1 | 4e-17 | basic leucine-zipper 7 |