PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT4G37730.1
Common NameAtbZIP7, bZIP7
Organism
Arabidopsis thaliana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 305aa    MW: 35698.5 Da    PI: 7.2216
Description basic leucine-zipper 7
Gene Model
Gene Model ID Type Source Coding Sequence
AT4G37730.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.1e-11197254562
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                  ++ +r+++NRe+A+rsR RK+  i++L+e v  L+ eN++L ++l     + +++ s+
  AT4G37730.1 197 RKRKRMESNRESAKRSRMRKQSHIDNLREQVNRLDLENRELGNRLRLVLHQLQRVNSD 254
                  67899************************************99888777766666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-11186250No hitNo description
SMARTSM003385.9E-15193257IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.001195258IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.82E-10197248No hitNo description
PfamPF001703.5E-9197244IPR004827Basic-leucine zipper domain
CDDcd147025.65E-19198249No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000013anatomycauline leaf
PO:0000037anatomyshoot apex
PO:0000230anatomyinflorescence meristem
PO:0000293anatomyguard cell
PO:0009005anatomyroot
PO:0009009anatomyplant embryo
PO:0009010anatomyseed
PO:0009025anatomyvascular leaf
PO:0009029anatomystamen
PO:0009030anatomycarpel
PO:0009031anatomysepal
PO:0009032anatomypetal
PO:0009046anatomyflower
PO:0009047anatomystem
PO:0009052anatomyflower pedicel
PO:0020038anatomypetiole
PO:0020100anatomyhypocotyl
PO:0020137anatomyleaf apex
PO:0025022anatomycollective leaf structure
PO:0025281anatomypollen
PO:0001078developmental stageplant embryo cotyledonary stage
PO:0001081developmental stagemature plant embryo stage
PO:0001185developmental stageplant embryo globular stage
PO:0004507developmental stageplant embryo bilateral stage
PO:0007103developmental stageLP.10 ten leaves visible stage
PO:0007611developmental stagepetal differentiation and expansion stage
PO:0007616developmental stageflowering stage
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MTQKLFIQYS LRSYIVFWKY DQITPWFVHK YQAPTMQFFP FPLLISLISL LEKLLAIMLS  60
TAPAFSFSEP GLVNQFSGFQ TGFTPWEWDC SDLFFVDQMS LEPAIPSPCY GESDTGSVKI  120
NSGSHDMKTG SDESCAGFVK INPRCDDADI SNDLPCSQAD EPDSDDTKQL TAITNFGSGE  180
NNHNRKKMIQ PEMTDERKRK RMESNRESAK RSRMRKQSHI DNLREQVNRL DLENRELGNR  240
LRLVLHQLQR VNSDNNRLVT EQEILRLRLS EMRRILIIRQ LQQQQQWELH NRRMIMTEQN  300
HPHLQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184200RKKMIQPEMTDERKRKR
2209214KRSRMR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
At.432350.0root
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible253064_at0.0
Expression AtlasAT4G37730-
AtGenExpressAT4G37730-
ATTED-IIAT4G37730-
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT4G37730.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT4G37730
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAL0357090.0AL035709.1 Arabidopsis thaliana DNA chromosome 4, BAC clone T28I19 (ESSA project).
GenBankAL1615920.0AL161592.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88.
GenBankCP0026870.0CP002687.1 Arabidopsis thaliana chromosome 4 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_195487.10.0basic leucine-zipper 7
TrEMBLA0A178UR910.0A0A178UR91_ARATH; BZIP7
TrEMBLQ9T0620.0Q9T062_ARATH; BZIP transcription factor-like protein
STRINGAT4G37730.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78551840
Representative plantOGRP8744815
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Jakoby M, et al.
    bZIP transcription factors in Arabidopsis.
    Trends Plant Sci., 2002. 7(3): p. 106-11
    [PMID:11906833]
  3. Satoh R,Fujita Y,Nakashima K,Shinozaki K,Yamaguchi-Shinozaki K
    A novel subgroup of bZIP proteins functions as transcriptional activators in hypoosmolarity-responsive expression of the ProDH gene in Arabidopsis.
    Plant Cell Physiol., 2004. 45(3): p. 309-17
    [PMID:15047879]
  4. Deppmann CD, et al.
    Dimerization specificity of all 67 B-ZIP motifs in Arabidopsis thaliana: a comparison to Homo sapiens B-ZIP motifs.
    Nucleic Acids Res., 2004. 32(11): p. 3435-45
    [PMID:15226410]
  5. Ehlert A, et al.
    Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors.
    Plant J., 2006. 46(5): p. 890-900
    [PMID:16709202]
  6. Deppmann CD,Alvania RS,Taparowsky EJ
    Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks.
    Mol. Biol. Evol., 2006. 23(8): p. 1480-92
    [PMID:16731568]
  7. Efroni I, et al.
    Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses.
    Dev. Cell, 2013. 24(4): p. 438-45
    [PMID:23449474]