PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000141.1_g00080.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family EIL
Protein Properties Length: 578aa    MW: 64171.8 Da    PI: 5.0598
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000141.1_g00080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3272.81.5e-831127792347
                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
                     EIN3  92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
                              raWWkekv+fd+ngpaai+ky+a++ +  ++ ++     ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+
  Itr_sc000141.1_g00080.1  11 RAWWKEKVKFDKNGPAAIAKYEAECRARVEGVGN--LMGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGN 94 
                              89*******************9999998877766..4799999******************************************* PP

                              -HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
                     EIN3 178 elwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                              e+ww+++ l++    ppykkphdlkk+wkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l vl++ee+++++ s +
  Itr_sc000141.1_g00080.1  95 EEWWEKMDLPTGLT-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESSIWLGVLEREEALIRQPSGD 179
                              *****999997776.*********************************************************************99 PP

                              ..XX.......XXXXXXXXXXXXXXXXXXXX..........XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......X CS
                     EIN3 264 ..ss.......slrkqspkvtlsceqkedve..........gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcq 330
                                ss         r+++++  +s+++++dv+           ++es  ++v   +     +vv k ++ +++ +k s++   r   
  Itr_sc000141.1_g00080.1 180 ngSSgiseaptRGRSEKKRPSVSSDSDYDVDgiddgpssvsSRDESG-NQVLDAHP---SNVVPKSRQSERQGNKRSKR-QKRVKP 260
                              663378788765566888899999999****7666555542222222.33333333...34444433333333333322.235566 PP

                              XXXXXX.XXXXXXXXXX CS
                     EIN3 331 ssqfrgsetelifadkn 347
                              + ++++  ++l ++dk+
  Itr_sc000141.1_g00080.1 261 TPAVQETPPSLNLNDKE 277
                              66666666777777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.0E-7911170No hitNo description
Gene3DG3DSA:1.10.3180.101.4E-7047176IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.53E-6151174IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MAVMEEIGVD RAWWKEKVKF DKNGPAAIAK YEAECRARVE GVGNLMGNSQ SVLQDLQDAT  60
LGSLLSSLMQ HCDPPQRKYP LEKGVPPPWW PTGNEEWWEK MDLPTGLTPP YKKPHDLKKM  120
WKVGVLTAVI KHMSPDIAKI RKLVRQSKCL QDKMTAKESS IWLGVLEREE ALIRQPSGDN  180
GSSGISEAPT RGRSEKKRPS VSSDSDYDVD GIDDGPSSVS SRDESGNQVL DAHPSNVVPK  240
SRQSERQGNK RSKRQKRVKP TPAVQETPPS LNLNDKEHGD EPGDPLPDIN NSNTTLAVHL  300
MNENQKDGSQ PVTPLEKSAE GQSHLPSGDS DHSIIPSANE VSTQTAFAGK RSTVHPMPQN  360
SEAVQYESRS QLGASDCAIP HQIQDSQIFN GQQFSGTDDR PGSSMFHYGP LIPEMHYEPH  420
KSGSQNSALN PEPQSSGYHH GSQYPDLHQS SLYQYYNPST DFGSSRDEER SRLEFNELQM  480
RPDNFGVNST VVQSTGNDVN DHHYGKDPFQ NDHDRPVDVP PMMTITDNFE PPVTSVSPDY  540
TRLNSPISFG IDVPNAFETD VDSFLDEDLM TIMTFFAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A9e-71501819140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019155618.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_019155619.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_019155620.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_019155621.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_019155622.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_019155623.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A484NS870.0A0A484NS87_9ASTE; Uncharacterized protein
STRINGXP_009788577.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-99ETHYLENE-INSENSITIVE3-like 3