PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_79696.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 317aa    MW: 33636.5 Da    PI: 4.5651
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_79696.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.78.7e-14121391128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek..ewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                   lpp f+F+Ptd+++v +yL +++ g +++ +++i e d  ++ Pw+L +++ ++    +  f+ +       g+r++r +   g+W+ +  ++ + +
  MLOC_79696.1  12 LPPAFKFDPTDDDIVAYYLLPRALGLPNPHAHAIIEDDPGSAPPWELLRRHGGDGGidHALFYGSPTA----GRRRKRtVKGGGVWQGQKVNEGIAT 104
                   79*************************999899**************754433222335567766543....6677774566999****99999998 PP

           NAM  95 k......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          +      +  L+f      + ++   vmhey++
  MLOC_79696.1 105 LlgpggaELDIAYKRYDLTFK-----RKVSMGYVMHEYEI 139
                   666654222224444567775.....345688******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-209154IPR003441NAC domain
PROSITE profilePS5100521.75712155IPR003441NAC domain
PfamPF023652.3E-1213139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MEASKFGFGP NLPPAFKFDP TDDDIVAYYL LPRALGLPNP HAHAIIEDDP GSAPPWELLR  60
RHGGDGGIDH ALFYGSPTAG RRRKRTVKGG GVWQGQKVNE GIATLLGPGG AELDIAYKRY  120
DLTFKRKVSM GYVMHEYEIT SPPLPGKVLS RVKISSNAKG KAAAAADQQI VLPDPELPGT  180
SYYDHAAAAD QQVVLPDPEL LGTSYNDHDA AAMESNGEGL GDTQAGALSG GNGGDYCYEP  240
LNCILPEGEY MDNGLSFTDQ LAAAMNSDGQ GFTAAQAGAF YGCGMVETNG AYYGPSPFFP  300
VASQEVAPWP NQLGQIH
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_79696.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198232.11e-162NAC domain-containing protein 68-like
TrEMBLA0A287UNM50.0A0A287UNM5_HORVV; Uncharacterized protein
STRINGMLOC_79696.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143011926
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.15e-07NAC domain containing protein 41