PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_79342.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 241aa MW: 25423.1 Da PI: 9.6417 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 77.8 | 1.4e-24 | 170 | 233 | 1 | 64 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL+a N +L++el++lk+ +++++ e++ MLOC_79342.3 170 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKEDCKTMEVENK 233 89*********************************************************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-17 | 162 | 229 | No hit | No description |
Pfam | PF00170 | 5.4E-22 | 170 | 232 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.1E-21 | 170 | 234 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.863 | 172 | 235 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-11 | 173 | 228 | No hit | No description |
CDD | cd14702 | 8.30E-18 | 175 | 225 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 177 | 192 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MYHHPAAAYY AHAHASMAAG VPYMAGESAS AAGKRVGKTR RVPSGEINSS SGSGDAGSQG 60 SSEKGDAGAN QKGSSSSAKR RKSGATNTEG EPSQAATVQN AVTESPVEVK DRCASKLLVL 120 APGRAALTTP APNLNSGIDP LSASPSSLGQ GEVNAAASSQ SNASLSQMDE RELKRERRKQ 180 SNRESARRSR LRKQQECEEL AQKVSELTAA NGTLRSELDQ LKEDCKTMEV ENKQLMCRVK 240 Y |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 192 | RRSRLRK |
2 | 186 | 193 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_79342.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK359835 | 0.0 | AK359835.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1104F02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020175793.1 | 1e-103 | DNA-binding protein EMBP-1 | ||||
Swissprot | P25032 | 1e-112 | EMBP1_WHEAT; DNA-binding protein EMBP-1 | ||||
TrEMBL | M0Z912 | 1e-168 | M0Z912_HORVV; Uncharacterized protein | ||||
STRING | MLOC_79342.2 | 1e-169 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 7e-22 | basic region/leucine zipper transcription factor 16 |