PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_79342.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 276aa MW: 28923.8 Da PI: 8.4785 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 77.4 | 1.8e-24 | 170 | 233 | 1 | 64 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv eL+a N +L++el++lk+ +++++ e++ MLOC_79342.2 170 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKEDCKTMEVENK 233 89*********************************************************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-17 | 162 | 229 | No hit | No description |
Pfam | PF00170 | 8.9E-22 | 170 | 232 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.1E-21 | 170 | 234 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.863 | 172 | 235 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.85E-12 | 173 | 228 | No hit | No description |
CDD | cd14702 | 2.17E-19 | 175 | 225 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 177 | 192 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence Send to blast |
MYHHPAAAYY AHAHASMAAG VPYMAGESAS AAGKRVGKTR RVPSGEINSS SGSGDAGSQG 60 SSEKGDAGAN QKGSSSSAKR RKSGATNTEG EPSQAATVQN AVTESPVEVK DRCASKLLVL 120 APGRAALTTP APNLNSGIDP LSASPSSLGQ GEVNAAASSQ SNASLSQMDE RELKRERRKQ 180 SNRESARRSR LRKQQECEEL AQKVSELTAA NGTLRSELDQ LKEDCKTMEV ENKQLMGKIL 240 GHDDKMQQSE GPSVVTTLSI QVEPSEPHHG GDGKAT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 192 | RRSRLRK |
2 | 186 | 193 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_79342.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK359835 | 0.0 | AK359835.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1104F02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020175793.1 | 1e-130 | DNA-binding protein EMBP-1 | ||||
Swissprot | P25032 | 1e-138 | EMBP1_WHEAT; DNA-binding protein EMBP-1 | ||||
TrEMBL | M0Z912 | 0.0 | M0Z912_HORVV; Uncharacterized protein | ||||
STRING | MLOC_79342.2 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2160 | 36 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 6e-22 | basic region/leucine zipper transcription factor 16 |