 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_79152.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
E2F/DP |
| Protein Properties |
Length: 226aa MW: 25248.9 Da PI: 7.2146 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_79152.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 52.4 | 8.4e-17 | 22 | 57 | 37 | 71 |
E2F_TDP 37 e..dvknkrRRiYDilNVLealnliekkekneirwkg 71
+ d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
MLOC_79152.2 22 QqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 57
14589**********************.*******98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042023 | Biological Process | DNA endoreduplication |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MAIPSGQLFV MCNVLIVYKI QQQYDEKNIR RRVYDALNVL MAMDIISKDK KEIQWKGLPR 60
TSLSDIDKLK TELIGLKGRI DKKSAYLQEL QDQYVGLQNL VERNEQLYGS GDAPSGGVAL 120
PFILVQTRPH ATVEVEISED MQLVHFDFNS TPFELHDDSF VLKAMGFSGK EETDGTVALV 180
ANAVECSSAS NVHGHRSPQP ARPNGTRLRT PPPIPGILKG RVKHEH
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK372752 | 0.0 | AK372752.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3011E24. |
