PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_76431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | B3 | ||||||||
Protein Properties | Length: 231aa MW: 26592.4 Da PI: 10.172 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.7 | 3.7e-17 | 135 | 225 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f+ +t+s+v+ +l+lp +f+++h k ++ l+lede+g + e + k++ l++GW++F+ +++L +gD +vF+l++r++f +v ++ MLOC_76431.1 135 FVRPMTQSHVTGGFWLSLPMPFCRKHLPK--RDERLILEDEQGVESETLYLAPKNG----LSAGWRGFAIQHDLVDGDCLVFELIDRTKF--KVYII 223 78899*********************423..4457***********9999555555....9************************99999..99998 PP -S CS B3 98 rk 99 r+ MLOC_76431.1 224 RQ 225 86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.4E-19 | 131 | 226 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 8.04E-22 | 132 | 226 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.58E-25 | 134 | 224 | No hit | No description |
Pfam | PF02362 | 3.7E-15 | 135 | 225 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.0E-18 | 135 | 226 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.392 | 135 | 226 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MAGAIAYEEQ RRRQVEENKR KLEELKLHHL SAAVREAATP KPSPAKSVKR KRVPREDGED 60 APVRRSGRVA SLPEQPKYRF EDVFHVLEKK IRRGSRKTTS TRSDLINRVY ATDVAREYAI 120 AKAKELQAKL ESASFVRPMT QSHVTGGFWL SLPMPFCRKH LPKRDERLIL EDEQGVESET 180 LYLAPKNGLS AGWRGFAIQH DLVDGDCLVF ELIDRTKFKV YIIRQSSYYE P |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_76431.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020160679.1 | 1e-142 | B3 domain-containing protein Os06g0194400-like | ||||
Swissprot | Q69V36 | 1e-98 | Y6944_ORYSJ; B3 domain-containing protein Os06g0194400 | ||||
TrEMBL | A0A287W2A7 | 1e-168 | A0A287W2A7_HORVV; Uncharacterized protein | ||||
STRING | MLOC_76431.2 | 1e-170 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1756 | 38 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 9e-60 | B3 family protein |
Publications ? help Back to Top | |||
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