PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_72368.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 307aa MW: 33295.9 Da PI: 6.8014 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35 | 3.1e-11 | 175 | 220 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ MLOC_72368.4 175 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 220 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-14 | 171 | 235 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.76 | 173 | 229 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.3E-10 | 175 | 225 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.3E-14 | 175 | 229 | No hit | No description |
SuperFamily | SSF57959 | 1.55E-11 | 175 | 229 | No hit | No description |
CDD | cd14703 | 2.20E-24 | 176 | 226 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 178 | 193 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MAQLPPKIPT MAPAWPEFGG GHHHSAHARH HHHQRSPSMG AFLAAPMPPL PPPAPANAGA 60 QQPSWVDEFL DFSAAKRGAH RRTVSDSVAF LDDSNAGGGA HEFDRLDDDQ LMSMFSDELA 120 PQRQAQAASA SSPSDHNSIN DEKQDKGDTE EAQSHCNGDG AAPGQPSSPA TVDPKRVKRI 180 LANRQSAQRS RVRKLQYISE LERSVTSLQT EVSALSPRVA FLDHQRSLLT LGNSHLKQRI 240 AALAQDKIFK DAHQEALKKE IERLRQIYQQ QSLRNAEPPA DDEGPLVRGD NNGLIASEGT 300 AAACLPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_72368.4 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020191576.1 | 1e-173 | basic leucine zipper 2-like | ||||
Swissprot | Q5QNI5 | 1e-114 | BZP02_ORYSJ; Basic leucine zipper 2 | ||||
TrEMBL | M0YSE3 | 0.0 | M0YSE3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_72368.4 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 2e-90 | bZIP family protein |
Publications ? help Back to Top | |||
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