PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_72368.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 275aa    MW: 29980.3 Da    PI: 7.9112
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_72368.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.5e-11175216546
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                   kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL 
  MLOC_72368.2 175 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALS 216
                   8999********************************998886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-14171235IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.76173229IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11175229No hitNo description
PfamPF001705.0E-10175225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-14175229No hitNo description
CDDcd147031.09E-25176226No hitNo description
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAQLPPKIPT MAPAWPEFGG GHHHSAHARH HHHQRSPSMG AFLAAPMPPL PPPAPANAGA  60
QQPSWVDEFL DFSAAKRGAH RRTVSDSVAF LDDSNAGGGA HEFDRLDDDQ LMSMFSDELA  120
PQRQAQAASA SSPSDHNSIN DEKQDKGDTE EAQSHCNGDG AAPGQPSSPA TVDPKRVKRI  180
LANRQSAQRS RVRKLQYISE LERSVTSLQT EVSALSPRVA FLDHQRSLLT LGNSHLKQRI  240
AALAQDKIFK DGDRHCHPSQ LLVFRNFAPA TVKFN
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_72368.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191576.11e-138basic leucine zipper 2-like
SwissprotQ5QNI51e-115BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLM0YSE10.0M0YSE1_HORVV; Uncharacterized protein
STRINGMLOC_72368.40.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-72bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]