PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_68986.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 371aa    MW: 41711.3 Da    PI: 8.3567
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_68986.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.3e-115991133
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33
                  e++ k  rr+++NReAAr+sR+RKka+i++Le 
  MLOC_68986.1 59 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLES 91
                  6778999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-857104No hitNo description
SMARTSM003388.7E-759148IPR004827Basic-leucine zipper domain
PfamPF001702.5E-86091IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.00261103IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.65E-763104No hitNo description
PROSITE patternPS0003606681IPR004827Basic-leucine zipper domain
PfamPF141448.2E-29157231IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MEELATGSRR QQQDHHLHLQ HQHQQQQPAF ATAESAGASN RDVKPLTKKE HKRGLSTGER  60
DPKTLRRLAQ NREAARKSRL RKKAYIQQLE SSRIRLAQIE QELHSARAQG VLYPGSSLLA  120
EQGIAGKGLG GIDGLSSEAA MFDVEYARWQ EEHNRLMYEL RAALQQHLPE GELQMYVESC  180
LAHHDEVLAI KDAVIKGDVF HLISGVWRSP AERCFLWLGG FRPSEVIKMV LSHVDPLTEQ  240
QIVAVYGLQQ SAVQTEEALS QGLDALYQSL SDTVVSDALT CCSTPNVSNY MGQMGLAVHK  300
LSTLEGVVRQ AEKLRQQTLH RLHQVLTARQ MARSLLAVSD YFHRLRVLSS FWVNRNRMAP  360
SDQQLEAGPH T
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_68986.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3756510.0AK375651.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3100G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159964.10.0transcription factor TGA2-like isoform X2
SwissprotQ52MZ21e-138TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A287RSH90.0A0A287RSH9_HORVV; Uncharacterized protein
TrEMBLF2EHM40.0F2EHM4_HORVV; Predicted protein
STRINGMLOC_68986.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.21e-129bZIP family protein