PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_67250.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 140aa    MW: 15852 Da    PI: 11.7457
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_67250.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.62.8e-11127102128
           NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                   ++ktLvfy+grap+g+ktdW++heyrl
  MLOC_67250.2   1 MRKTLVFYTGRAPNGRKTDWIIHEYRL 27 
                   89***********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-11137IPR003441NAC domain
PROSITE profilePS5100516.536155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MRKTLVFYTG RAPNGRKTDW IIHEYRLQTN EHAPTQVPNS SLLHPPSPSC REFVVDDHDH  60
GYDVAGGRLG GVPCVPEANP EPETVLHLPR IRRRPGSRRL LRHAAVAAAR PSRRPPFPAE  120
RQRGYGSRRP RFPRPGHPVL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_67250.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3730021e-120AK373002.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3017O09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A287JTN81e-95A0A287JTN8_HORVV; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.15e-15NAC domain containing protein 76