PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_67085.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 159aa    MW: 18042.2 Da    PI: 10.186
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_67085.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.71.5e-291871255
       G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                  pr+rWt+eLH++F+eav+ LGG+++AtPk+il+lm+ kg++++h+kSHLQ+YR+
  MLOC_67085.1 18 PRVRWTEELHRQFIEAVDCLGGQDEATPKRILQLMGAKGVSISHIKSHLQMYRS 71
                  9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.3091474IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-271472IPR009057Homeodomain-like
SuperFamilySSF466891.88E-161672IPR009057Homeodomain-like
TIGRFAMsTIGR015578.2E-241871IPR006447Myb domain, plants
PfamPF002491.6E-81970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MRGFERRGVR QYNRSDEPRV RWTEELHRQF IEAVDCLGGQ DEATPKRILQ LMGAKGVSIS  60
HIKSHLQMYR SSCMNTNTTH RVRDHRTIDA SWNGYVNDIA AASDRIEASS YTTLPRGQRS  120
SPPNQIGEVF GSWAQSRGRL PWNSNMVITP SEKVGVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-171772156Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-171772156Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-171772156Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-171772156Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-171772257Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_67085.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3716050.0AK371605.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2138C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187651.12e-78two-component response regulator ARR11-like
TrEMBLM0Y9Q71e-116M0Y9Q7_HORVV; Uncharacterized protein
STRINGMLOC_67085.21e-112(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.17e-26G2-like family protein