PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_67081.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | G2-like | ||||||||
Protein Properties | Length: 181aa MW: 19650.6 Da PI: 9.6799 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 47.5 | 3.9e-15 | 9 | 37 | 26 | 54 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYR 54 AtPk++le+m+vk Lt++hvkSHLQ+YR MLOC_67081.3 9 DATPKRVLEAMGVKELTISHVKSHLQMYR 37 7**************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 4.12E-5 | 8 | 37 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 8.0E-14 | 8 | 37 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-11 | 9 | 37 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MSWSLLISDA TPKRVLEAMG VKELTISHVK SHLQMYRGPS TRKDKKEAQP QPQPLQRRHS 60 CAADEQGCGG PKPFMCPPLK RARTTGTVAA HKGMQGSKGI SETKTSGAAN QYCIDDYMQA 120 MAMERRIKEE GLSGWQRDAA PAAAVSSLQT VGCLEQGSAL AGDFKIIKPE ARYCYPGLAV 180 K |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_67081.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020185290.1 | 3e-77 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | M0Y9Q3 | 1e-123 | M0Y9Q3_HORVV; Uncharacterized protein | ||||
STRING | MLOC_67081.2 | 1e-122 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04580.1 | 4e-12 | G2-like family protein |