PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_63066.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 316aa MW: 33778 Da PI: 7.6954 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.5 | 4.6e-21 | 219 | 281 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++ MLOC_63066.6 219 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 281 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF16596 | 1.9E-36 | 68 | 193 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.3E-18 | 213 | 278 | No hit | No description |
SMART | SM00338 | 5.2E-21 | 219 | 283 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-20 | 219 | 281 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.082 | 221 | 284 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.38E-10 | 222 | 278 | No hit | No description |
CDD | cd14702 | 5.05E-22 | 224 | 275 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 226 | 241 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence Send to blast |
MMPPYGTPPY VIYPPGGVYA HPSMRPGAHP FAPYAMSSSN GNPDATGTTT TPATAGGETN 60 GKSSDGIEKS PIKRSKGSLG SLNMITGKNC VEHGKTSGAS ANGTISQSGE SGSESSSEGS 120 EANSQNDLQH KESGQEQDGD VRSSQNGVSP SPSQAQLKQT SAIMQMPSSG PVPGPTTNLK 180 IGMDYWANTA SSSPALHGKV TPTAIPGDLA PTEPWMQDER ELKRQKRKQS NRDSARRSRL 240 RKQAECEELA QRAEVLKQEN ASLKDEVSRI RKEYDELLSK NSSLKDNIGD KQHKTDEAGL 300 HNKLQRSGDD NQKDTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 235 | 241 | RRSRLRK |
2 | 235 | 242 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00291 | DAP | Transfer from AT2G35530 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_63066.6 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK366562 | 0.0 | AK366562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044E07. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189928.1 | 0.0 | bZIP transcription factor 16-like | ||||
Swissprot | B6E107 | 0.0 | BZP1B_WHEAT; bZIP transcription factor 1-B | ||||
TrEMBL | M0XU72 | 0.0 | M0XU72_HORVV; Uncharacterized protein | ||||
STRING | MLOC_63066.1 | 0.0 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-76 | basic region/leucine zipper transcription factor 16 |
Publications ? help Back to Top | |||
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