PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_63066.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 316aa    MW: 33778 Da    PI: 7.6954
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_63066.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.54.6e-21219281163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++
  MLOC_63066.3 219 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 281
                   89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.9E-3668193No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-18213278No hitNo description
SMARTSM003385.2E-21219283IPR004827Basic-leucine zipper domain
PfamPF001703.9E-20219281IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.082221284IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10222278No hitNo description
CDDcd147025.05E-22224275No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MMPPYGTPPY VIYPPGGVYA HPSMRPGAHP FAPYAMSSSN GNPDATGTTT TPATAGGETN  60
GKSSDGIEKS PIKRSKGSLG SLNMITGKNC VEHGKTSGAS ANGTISQSGE SGSESSSEGS  120
EANSQNDLQH KESGQEQDGD VRSSQNGVSP SPSQAQLKQT SAIMQMPSSG PVPGPTTNLK  180
IGMDYWANTA SSSPALHGKV TPTAIPGDLA PTEPWMQDER ELKRQKRKQS NRDSARRSRL  240
RKQAECEELA QRAEVLKQEN ASLKDEVSRI RKEYDELLSK NSSLKDNIGD KQHKTDEAGL  300
HNKLQRSGDD NQKDTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235241RRSRLRK
2235242RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_63066.3
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3665620.0AK366562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044E07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189928.10.0bZIP transcription factor 16-like
SwissprotB6E1070.0BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLM0XU720.0M0XU72_HORVV; Uncharacterized protein
STRINGMLOC_63066.10.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-76basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]