PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MLOC_63066.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 153aa MW: 17252.2 Da PI: 9.5271 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68.4 | 1.1e-21 | 56 | 118 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++ MLOC_63066.11 56 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 118 89***********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-18 | 50 | 115 | No hit | No description |
SMART | SM00338 | 5.2E-21 | 56 | 120 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.7E-21 | 56 | 118 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.082 | 58 | 121 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.63E-11 | 59 | 115 | No hit | No description |
CDD | cd14702 | 4.45E-19 | 61 | 112 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 63 | 78 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 153 aa Download sequence Send to blast |
MQMPSSGPVP GPTTNLKIGM DYWANTASSS PALHGKVTPT AIPGDLAPTE PWMQDERELK 60 RQKRKQSNRD SARRSRLRKQ AECEELAQRA EVLKQENASL KDEVSRIRKE YDELLSKNSS 120 LKDNIGDKQH KTDEAGLHNK LQRSGDDNQK DTN |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 72 | 78 | RRSRLRK |
2 | 72 | 79 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}. |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00291 | DAP | Transfer from AT2G35530 | Download |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | MLOC_63066.11 |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK366562 | 0.0 | AK366562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044E07. | |||
GenBank | AK373997 | 0.0 | AK373997.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3050F17. | |||
GenBank | AY150677 | 0.0 | AY150677.1 Hordeum vulgare subsp. vulgare bZIP transcription factor ZIP1 (ZIP1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189928.1 | 1e-102 | bZIP transcription factor 16-like | ||||
Swissprot | A0A3B6MPP5 | 1e-103 | BZP1D_WHEAT; bZIP transcription factor 1-D | ||||
Swissprot | B6E107 | 1e-103 | BZP1B_WHEAT; bZIP transcription factor 1-B | ||||
TrEMBL | A0A287QSB6 | 1e-108 | A0A287QSB6_HORVV; Uncharacterized protein | ||||
TrEMBL | M0XU65 | 1e-109 | M0XU65_HORVV; Uncharacterized protein | ||||
TrEMBL | M0XU72 | 1e-108 | M0XU72_HORVV; Uncharacterized protein | ||||
STRING | TRIUR3_34165-P1 | 1e-102 | (Triticum urartu) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G35530.1 | 5e-48 | basic region/leucine zipper transcription factor 16 |
Publications ? help Back to Top | |||
---|---|---|---|
|