PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_60135.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 169aa    MW: 18363.5 Da    PI: 9.9909
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_60135.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.57.9e-15109153448
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                   + r+ r++kNRe+A rsR+RK+a++ eLe + ++L  eN++L k+
  MLOC_60135.2 109 VDRQLRMIKNRESAARSRARKQAYTNELEMELAQLRRENQMLVKR 153
                   679**************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-6106166IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576108153IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10111157No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-12111153No hitNo description
CDDcd147077.03E-22111155No hitNo description
PfamPF001703.8E-12111153IPR004827Basic-leucine zipper domain
PROSITE patternPS000360114128IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MEELWKDMSL PSTPAALQSY HIHSPAVAPY HAAAYLAGPV PLPRGPPYTA LTLSSSVEFA  60
FPGGGSSGKP TGSTSSNDYS FGFPSASASG PKSSNNNGKR VQVNAPAAVD RQLRMIKNRE  120
SAARSRARKQ AYTNELEMEL AQLRRENQML VKREQDFINV RAYSTSPFD
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_60135.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3758360.0AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164874.12e-53protein FD-like
TrEMBLM0XHS01e-120M0XHS0_HORVV; Uncharacterized protein
STRINGMLOC_60135.11e-113(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.22e-17basic region/leucine zipper motif 27