PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_58614.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 121aa MW: 12967.6 Da PI: 11.5851 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.5 | 2.5e-12 | 73 | 106 | 3 | 36 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 + k rr+++NReAAr+sR+RKka+i++Le+ MLOC_58614.4 73 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRV 106 67999************************97443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0034 | 71 | 120 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.4E-9 | 71 | 117 | No hit | No description |
PROSITE profile | PS50217 | 8.898 | 73 | 117 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-9 | 74 | 115 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.62E-7 | 75 | 115 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 78 | 93 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MHVVAEPSPK AATSASNIIA ASSNLKLQRP PSNSKQSSMP APGGKATVKR EGSGSGGAGT 60 PSTSEHEGPR TPDAKTLRRL AQNREAARKS RLRKKAYIQN LETSRVRLSQ MEQEMQRCSA 120 Q |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_58614.4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK368931 | 0.0 | AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020178471.1 | 2e-71 | transcription factor TGAL9-like isoform X4 | ||||
Swissprot | Q0E342 | 1e-27 | TGAL9_ORYSJ; Transcription factor TGAL9 | ||||
TrEMBL | A0A287E2H2 | 3e-80 | A0A287E2H2_HORVV; Uncharacterized protein | ||||
STRING | MLOC_58614.3 | 3e-80 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 5e-21 | bZIP family protein |
Publications ? help Back to Top | |||
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