PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_58614.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 228aa    MW: 24777.9 Da    PI: 10.0775
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_58614.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.7e-12153187337
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvke 37 
                   + k  rr+++NReAAr+sR+RKka+i++Le+    
  MLOC_58614.3 153 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRVR 187
                   67999************************974433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-7151211IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-9151197No hitNo description
PROSITE profilePS502178.898153197IPR004827Basic-leucine zipper domain
PfamPF001704.9E-9154195IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.25E-8157197No hitNo description
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGDRPWQQPH EHASCSAQAG MIQASTAATS SIHGSIMRKD PGGYEDLAEL DQALFLYINS  60
QDQQPIQEQP QTLNIFPSRP MHVVAEPSPK AATSASNIIA ASSNLKLQRP PSNSKQSSMP  120
APGGKATVKR EGSGSGGAGT PSTSEHEGPR TPDAKTLRRL AQNREAARKS RLRKKAYIQN  180
LETSRVRLSQ MEQEMQRCSA QVCIFSVPQN VQISTFLWAT PSVMLAQQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_58614.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689310.0AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178468.11e-129transcription factor TGAL9-like isoform X1
SwissprotQ0E3426e-64TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBLA0A287E2H61e-145A0A287E2H6_HORVV; Uncharacterized protein
STRINGMLOC_58614.31e-168(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.32e-30bZIP family protein
Publications ? help Back to Top
  1. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]