PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_58529.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 404aa    MW: 43427.4 Da    PI: 9.3872
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_58529.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.24.8e-20323385163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   e+e+k+++rkq+NRe+ArrsR+RK+ae ee + +++ L++eN++Lk+el++l++++++l+se+
  MLOC_58529.3 323 EREVKKQKRKQSNRESARRSRLRKQAEWEEVASRADLLKQENSSLKEELKQLQEKCDSLTSEN 385
                   799**********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-251124IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.5E-15163291No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-15318382No hitNo description
PfamPF001704.3E-18323385IPR004827Basic-leucine zipper domain
SMARTSM003386.2E-20323387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.461325388IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-10326382No hitNo description
CDDcd147026.33E-22328379No hitNo description
PROSITE patternPS000360330345IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MGKGDVATRS KSQKSSTVQV CVNKLNCVSK YCHCLTLFYL FQNEQSTPTN PPTAYPDWSQ  60
FQAYYNVPGT AQMTPPAYFH STVAPSPQGH PYMWGPQMMP PYGTPPPYAT MYAQGTPYQQ  120
APMPPGSHPY SPYPVQAPNG TVQTPTSGAG GSETDKSNKN KRKTPLKRSK GSLGSLDVVT  180
VKDKTPPPKS LVSSSNEGSS QSESGSGSYS GGSSTNSKSG SQTKDGSEHG PANDASNKGV  240
TAQGTAVEPT QVSSGPVVLN PMMPYWPVPP PMPGQATGVN MGMDYWGAPT SVPMHGKAVA  300
APTSAPSSNS RDIVLSDPVI QDEREVKKQK RKQSNRESAR RSRLRKQAEW EEVASRADLL  360
KQENSSLKEE LKQLQEKCDS LTSENTSLHE KLKAVDSEKP NGNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1339345RRSRLRK
2339346RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_58529.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524800.0AK252480.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf155l09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189439.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020189441.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020189442.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_020189443.10.0bZIP transcription factor 16-like isoform X1
TrEMBLM0XBA50.0M0XBA5_HORVV; Uncharacterized protein
STRINGMLOC_58529.30.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-61basic region/leucine zipper transcription factor 16