PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_58027.4
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 274aa    MW: 29985.8 Da    PI: 8.3929
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_58027.4genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.41.5e-13169221355
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                   + +r rr+ +NRe+ArrsR+RK a++  Le  v++L++e  +L k+l e +++
  MLOC_58027.4 169 DTRRIRRMVSNRESARRSRRRKHAQLTDLELQVEQLKNESATLFKQLTEANQQ 221
                   56899***************************************777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-13167231IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726169221IPR004827Basic-leucine zipper domain
PfamPF001703.8E-11170221IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-11171222No hitNo description
SuperFamilySSF579591.85E-10171223No hitNo description
PROSITE patternPS000360174189IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MKKCASELEL EAFIRQHLAA AEAQRGRPGH GPDDDAGFGE HPSFSPGAGL PGLCFGDSVS  60
SCHYPKPLPL CLYRAVVFAR LTEFPPALQQ NALELQESNA GHLWWSDGLR APQHHAVPAP  120
TQSQTAAISA SPRETISGNQ ALETESDSDS ESLVEIGGGR CKRSGKSSDT RRIRRMVSNR  180
ESARRSRRRK HAQLTDLELQ VEQLKNESAT LFKQLTEANQ QFTTAVTDNR ILKSDVETLR  240
IKVKMAEDMV ARGAVSCGLG QQLGLAPFLN SRKM
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_58027.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3613380.0AK361338.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1138D02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167700.11e-145basic leucine zipper 9-like isoform X1
TrEMBLF2DBS41e-161F2DBS4_HORVV; Predicted protein
STRINGMLOC_58027.40.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20953796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.15e-27basic leucine zipper 9