PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_58027.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 242aa MW: 26358.4 Da PI: 8.0147 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.7 | 1.3e-13 | 137 | 189 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + +r rr+ +NRe+ArrsR+RK a++ Le v++L++e +L k+l e +++ MLOC_58027.2 137 DTRRIRRMVSNRESARRSRRRKHAQLTDLELQVEQLKNESATLFKQLTEANQQ 189 56899***************************************777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-13 | 135 | 199 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.726 | 137 | 189 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.1E-11 | 138 | 189 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-10 | 139 | 190 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.9E-12 | 139 | 190 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 142 | 157 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MKKCASELEL EAFIRQHLAA AEAQRGRPGH GPDDDAGFGE HPSFSPGAGL PGLCFGDSNA 60 LELQESNAGH LWWSDGLRAP QHHAVPAPTQ SQTAAISASP RETISGNQAL ETESDSDSES 120 LVEIGGGRCK RSGKSSDTRR IRRMVSNRES ARRSRRRKHA QLTDLELQVE QLKNESATLF 180 KQLTEANQQF TTAVTDNRIL KSDVETLRIK VKMAEDMVAR GAVSCGLGQQ LGLAPFLNSR 240 KM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT-3'. May be involved in the regulation of genes expressed during seed development (PubMed:7919992). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:7919992}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_58027.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK363257 | 0.0 | AK363257.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013M10. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020167701.1 | 1e-152 | basic leucine zipper 9-like isoform X2 | ||||
Swissprot | Q6ETX0 | 8e-63 | RSBZ3_ORYSJ; bZIP transcription factor RISBZ3 | ||||
TrEMBL | F2DH90 | 1e-177 | F2DH90_HORVV; Predicted protein | ||||
STRING | MLOC_58027.4 | 1e-161 | (Hordeum vulgare) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 3e-27 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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