PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_37092.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 425aa    MW: 46676.9 Da    PI: 9.3975
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_37092.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-11137165533
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                   k  rr+++NReAAr+sR+RKka+i++Le+
  MLOC_37092.2 137 KTLRRLAQNREAARKSRLRKKAYIQQLET 165
                   7789***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.9E-8133177No hitNo description
SMARTSM003384.7E-5133195IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.749135178IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-7137170No hitNo description
PfamPF001702.1E-8137165IPR004827Basic-leucine zipper domain
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
PfamPF141442.6E-26224295IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MADFDQTAIF LYLDGHDPQS IQEQRQTLNI FPSQPMHAAE ALNPAAKING GTVMAAMLAN  60
GGNPQQPSPK RPVQQQQLLL QGAPGGSNAA PSLPSSAKDN KNSASLVKKE GTSSGKGATS  120
SSTDPDREGS RRTQDPKTLR RLAQNREAAR KSRLRKKAYI QQLETSRIRL SQIEQQVQAG  180
RVQGVLLGTG DHHHQGLPSA PSFASMFDME YGRWVEEHSK LIFQLRALLN DNAPDNQVQV  240
LVGGAMAHHE ELLSLKAAIA RTDIFHLLCG VWASPAERCF LWLGGFRPTE VIKIMLKQVE  300
SLSEGQLLGI YNLQRWVQET EESLNHTMGT LQHSLSDTIA SPEAAGGNFM GHMSLALNKI  360
SSMEAIVRQA DALRQQTLHK LHGMLTVRQV AHCFVAIADY FHRLRAVSSL WASRPRHDEQ  420
GPPAP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_37092.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524000.0AK252400.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf157i09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190892.10.0transcription factor TGAL7-like
SwissprotQ6H4340.0TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLM0VTE70.0M0VTE7_HORVV; Uncharacterized protein
STRINGMLOC_37092.10.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-116bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]