PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_22590.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 374aa    MW: 39655.1 Da    PI: 7.5016
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_22590.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.24.1e-09109171163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke e   +e+ +l+  +
  MLOC_22590.1 109 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKEKEAVMQEYLTLQETN 171
                   89*****************************************************99998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-11109173IPR004827Basic-leucine zipper domain
PfamPF001706.0E-8109171IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.956111174IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-6113168No hitNo description
Gene3DG3DSA:1.20.5.1706.6E-5113179No hitNo description
CDDcd147021.74E-13114164No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MSDRSGQRQC RRGVSGDVEL DAAMALANMA ATLPAVQGTH TQHGASREEE EELASTRLTL  60
ELGKVGIQAS SCSSSSSAGC PSQQTRVAVA APGGGGYGPR PRHTLTEAEK EAKRLRRVLA  120
NRESARQTIL RRQAIRDELA RKVADLSSQN ESMKKEKEAV MQEYLTLQET NKQLKEQVTA  180
KTAEKAPPPV VTSMDTTPPA EQRAEATVST AAPLDAPRAP GFLYTTAGPS AVRVPYVWGS  240
WPYNPNANNP GGAASTAHAP PLCLPPFAWY YPVVTDPHGS PATSYAQPLH ETTSGGGSQG  300
TGGGTAEEDI DDDSCSLTLG LDVDRKCATS ADNGSSRAVA GDRERAVMAA EARKRRKELT  360
KLKQTHLGGR PGDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1352357RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_22590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615785.11e-97uncharacterized protein LOC4349815
TrEMBLM0VCP10.0M0VCP1_HORVV; Uncharacterized protein
STRINGMLOC_22590.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.17e-17bZIP family protein