PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_17213.9
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 186aa    MW: 20780.4 Da    PI: 5.672
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_17213.9genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.53.9e-101203655
       G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                  m+v+g+t++hvkSHLQkYRl
  MLOC_17213.9  1 MGVPGITIYHVKSHLQKYRL 20
                  99*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-9121IPR009057Homeodomain-like
PfamPF143792.3E-245398IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MGVPGITIYH VKSHLQKYRL AKYIPESPAE GSKEEKKDSS DSLSNTDSAP GSQINEALKM  60
QMEVQKRLHE QLEVQKQLQL RIEAQGKYLQ MIIEEQQKLG GSLEGSEERK LSHSPPSLDD  120
YPDSMRPSPK KPRLDDLSPD AVRGVTQPGF ESHLVGPWDQ ELCPKNICAP AFQVDEFKAD  180
PGLSKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_17213.9
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3551770.0AK355177.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1016P09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198212.11e-125myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW03e-46PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLF2CU751e-132F2CU75_HORVV; Predicted protein
TrEMBLM0V2F91e-133M0V2F9_HORVV; Uncharacterized protein
STRINGMLOC_17213.31e-133(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.22e-44G2-like family protein