PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_15316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bZIP | ||||||||
Protein Properties | Length: 211aa MW: 22755.7 Da PI: 9.4073 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.1 | 4.5e-09 | 61 | 123 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke kr rr NRe+Ar +R++a +eL++kv+ L ++N+ +kke ++ +++ +lk + MLOC_15316.1 61 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLASQNENMKKEKDMVLEQYLTLKETN 123 89*******************************************************999877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 5.1E-7 | 61 | 123 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 4.3E-10 | 61 | 125 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.657 | 63 | 126 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.85E-7 | 65 | 121 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-4 | 65 | 129 | No hit | No description |
CDD | cd14702 | 2.36E-14 | 66 | 116 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MEAEDEELAS TRLSLELGNV GIQSSPCSSS SSGAGQQPPQ SSAAVTGYGL SRPRHTLTEA 60 EKEAKRLRRV LANRESARQT ILRRQAIRDE LARKVADLAS QNENMKKEKD MVLEQYLTLK 120 ETNKQLKQQV AKTTKKKPSS APAFTPMDIA PPAQSAEATP PQTPPQPSFL YSAPPTSMPV 180 PYVWGSWPPC GPGVYEHGGN LAGMAGHAPP P |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_15316.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK359622 | 0.0 | AK359622.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1100C17. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020191657.1 | 1e-85 | uncharacterized protein LOC109777431 isoform X1 | ||||
Refseq | XP_020191661.1 | 1e-85 | uncharacterized protein LOC109777431 isoform X2 | ||||
TrEMBL | A0A287NI95 | 1e-150 | A0A287NI95_HORVV; Uncharacterized protein | ||||
STRING | MLOC_15316.1 | 1e-153 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3165 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 3e-21 | bZIP family protein |