PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_13416.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family EIL
Protein Properties Length: 470aa    MW: 51997.1 Da    PI: 4.8273
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_13416.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN33499.6e-107613252266
                   XXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
          EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksn.ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                   +lkkrmwkdq ll++l++ + +   +  +      ++a+k+   ++ ++rrk+m raQDg+L++Ml++me+cna+GfvYgi++e+g pv+g+sdsLr
  MLOC_13416.1  61 DLKKRMWKDQLLLMKLEGSSGHDRRATAQRpgtdlAQAEKEAeMPESRYRRKAMLRAQDGVLRHMLRMMEACNARGFVYGIVDETGMPVSGSSDSLR 157
                   8****************9998866555554677774444443277889************************************************* PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--T CS
          EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lsk 188
                   +WWke+v f+r+gp+a++      ++ s        +ss  h l ++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG+e wwg +g +++
  MLOC_13416.1 158 GWWKEDVGFERTGPTALVGP--TTAVES-------PGSSFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGHEVWWGLQGeTQA 245
                   ******************88..444533.......36789********************************************************* PP

                   T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..X CS
          EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..s 266
                   +qg+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq++msa++  ++++v+ qee + ++v+   +   
  MLOC_13416.1 246 HQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHRMSARDAETWSRVITQEETLDRQVQRALRitP 325
                   **********************************************************************9998854332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048739.5E-11361311No hitNo description
Gene3DG3DSA:1.10.3180.109.4E-63184319IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.01E-55189313IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MGSPSNDRPL PGLHELPRPA MDIGKAHADP ANPHGVAVAA EADLQDDSES ESVSESIEIA  60
DLKKRMWKDQ LLLMKLEGSS GHDRRATAQR PGTDLAQAEK EAEMPESRYR RKAMLRAQDG  120
VLRHMLRMME ACNARGFVYG IVDETGMPVS GSSDSLRGWW KEDVGFERTG PTALVGPTTA  180
VESPGSSFLH GLLDIQDSTL GSLLSALIQH CEPPQRSFPL DRGLPPPWWP TGHEVWWGLQ  240
GETQAHQGPP PYRKPHDLKK AWKISLLSAV IKHLSPRFDQ MRKLVWQSKR LQHRMSARDA  300
ETWSRVITQE ETLDRQVQRA LRITPLEEEP GDDDDKVPLQ EAERGLHIDK RKREVDHESA  360
GGSVDSGSGR ELGALPGIEG VAEADRNSID ELMKMYYSCL QGTDCGEQEI KDVAAGGREQ  420
SNTSSAETGV LDAAMVHDDM FDDFLSVADV VDMSDFPGSP IWHWGSSDLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-481903174130Protein ETHYLENE INSENSITIVE 3
4zds_B7e-481903174130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_13416.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3738050.0AK373805.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3044B06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200713.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ56e-87EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLM0URC90.0M0URC9_HORVV; Uncharacterized protein
STRINGMLOC_13416.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.15e-88EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]