PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KDD76808.1
Organism
Helicosporidium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales
Family ERF
Protein Properties Length: 318aa    MW: 33394.4 Da    PI: 10.2683
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KDD76808.1genomeUBCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.61.7e-09199243150
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 
                 s+++GV++   + rW+A+ r         k  slg f+ +eeAa+a+++++
  KDD76808.1 199 SRFRGVHQTFPTRRWEAQFRR------AgKPTSLGCFDREEEAARAYDKMM 243
                 789***************666......24*******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.37E-8199245IPR016177DNA-binding domain
PfamPF008472.6E-5199244IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-7200246IPR001471AP2/ERF domain
PROSITE profilePS5103211.232200262IPR001471AP2/ERF domain
SMARTSM003806.2E-4200268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MAPRAVPTTS SQDPPSQDAA TERSAEASTS GQSRPCSADS AVILEWIRGL ARGLPKPPAV  60
YRRPGENGEP KPLVKIHTWA DVKTRRELDL LASIGVAGGL QAATFVPTSQ HPLSLASASL  120
PSGRDVSGAG EYGSEALLSG GPGHPGLGSL GLGVAPSGGM MGSGGPGAGV GPGALPRSLG  180
RAGKASKSKG SGGGRTYTSR FRGVHQTFPT RRWEAQFRRA GKPTSLGCFD REEEAARAYD  240
KMMLWCELHN VTGVKGGITN FELSEYEGDV AWLQKITQDQ LVQVLRSDGR RQAAARNLKQ  300
KRDGHSPRHG VASEHSQC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A059LR900.0A0A059LR90_9CHLO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP27461414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25730.13e-09ethylene response DNA binding factor 3