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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Han006275 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
|
| Family |
GRAS |
| Protein Properties |
Length: 245aa MW: 26271.8 Da PI: 4.4148 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Han#S48352182 | PU_ref | Unigene | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 260.2 | 7.1e-80 | 2 | 243 | 122 | 342 |
GRAS 122 GlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsle 221
G+QWpaL+qaLa Rp+gpp++R+Tg+g+p+ ++++ l+e+g++La++A++++v+fef+ ++a +l+dle+++++++++E+laVn+v++lh+ll+++++++
Han006275 2 GMQWPALMQALALRPGGPPTFRLTGIGPPSGDNTDYLQEVGWKLAQLADTIHVEFEFRGFIAGSLADLEPSMFDLRNDEVLAVNSVFELHQLLARPGAID 101
9*****************************99*************************************************************9999998 PP
GRAS 222 serdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak.........................lpreseerikvErellgreivn 296
+ vL++vk++sP++++vveqea+hn++sFlerf+e+l+yys+lfdsle++ +++ s+e++++++++lg++i+n
Han006275 102 K----VLSAVKQMSPEILTVVEQEANHNGTSFLERFTESLHYYSTLFDSLESSgggdggvgggaavnggvdvgvngggVSPVSSEDRFMSEVYLGKQICN 197
8....*********************************************9999************************9999****************** PP
GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr 342
vvaceg +r+e+hetl +W+ rl+ aGF++v+l ++a kqa++ll+
Han006275 198 VVACEGVDRVEKHETLTQWKTRLDXAGFEAVHLXSNAFKQASMLLA 243
********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
XGMQWPALMQ ALALRPGGPP TFRLTGIGPP SGDNTDYLQE VGWKLAQLAD TIHVEFEFRG 60
FIAGSLADLE PSMFDLRNDE VLAVNSVFEL HQLLARPGAI DKVLSAVKQM SPEILTVVEQ 120
EANHNGTSFL ERFTESLHYY STLFDSLESS GGGDGGVGGG AAVNGGVDVG VNGGGVSPVS 180
SEDRFMSEVY LGKQICNVVA CEGVDRVEKH ETLTQWKTRL DXAGFEAVHL XSNAFKQASM 240
LLALS
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
