PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han001984
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family C2H2
Protein Properties Length: 276aa    MW: 30291.6 Da    PI: 9.6115
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32092886PU_unrefUnigeneView CDS
PUT-169a-Helianthus_annuus-18583PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.0014125147123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                +kC+ C+k Fs+   L  H  +H
  Han001984 125 HKCSVCNKEFSSYQALGGHKASH 147
                79**********99999998887 PP
2zf-C2H213.30.00025180202123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C++C++sF++   L  H r+H
  Han001984 180 HECSICHRSFPTGQALGGHKRRH 202
                78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.019125147IPR015880Zinc finger, C2H2-like
SuperFamilySSF576677.14E-6125147No hitNo description
PROSITE profilePS501579.64125152IPR007087Zinc finger, C2H2
PfamPF139124.1E-13125149IPR007087Zinc finger, C2H2
PROSITE patternPS000280127147IPR007087Zinc finger, C2H2
SuperFamilySSF576677.14E-6175202No hitNo description
PfamPF139124.3E-13179204IPR007087Zinc finger, C2H2
SMARTSM003550.066180202IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.286180202IPR007087Zinc finger, C2H2
PROSITE patternPS000280182202IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
HYKHFHYNLS SNLHHMALEA LNSPATTTAT PPPSFHYKDM NFPTTTTIIQ DSWNKGKRSK  60
RPRATLSAES DITHPSDAQH PTEEEYLAFC LMLLSRGGAN TGARLINTAA TQSPPRPPLP  120
QSISHKCSVC NKEFSSYQAL GGHKASHRKN TTDDHPSTST TTTTTATHTF STLKPSGRAH  180
ECSICHRSFP TGQALGGHKR RHYDGGNNSG VTTSGKTTSS TNSQPRDFDL NLPAFPEFHL  240
GLNVDLVKKS QRFIEDQEVE SPHPAKKQRL SVAGNV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022028019.11e-157zinc finger protein ZAT10-like
TrEMBLA0A251V6761e-156A0A251V676_HELAN; Putative zinc finger protein
STRINGXP_009772006.12e-66(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.14e-43salt tolerance zinc finger