PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN44673.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 499aa    MW: 54543.4 Da    PI: 6.4268
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN44673.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87.3e-31261319259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  KHN44673.1 261 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRNDPNMLVITYTSEHNHP 319
                 699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-31255321IPR003657WRKY domain
PROSITE profilePS5081132.822255321IPR003657WRKY domain
SuperFamilySSF1182902.09E-26258321IPR003657WRKY domain
SMARTSM007741.2E-37260320IPR003657WRKY domain
PfamPF031067.9E-26262319IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MDNYQGDLTD ILRASGGAYG STGTGTGTSS SDQLHTTSHH HHHSSSHITL SHNDHWHHHQ  60
HFSSSSSDPP ITFSSSSSVL IQDTNFGDPF STMRDPFLQE LDMPSASAYF TGGALELEAA  120
ATFGSVTNNT TSSTTATTVF ATAHKILEEH DNNNMRRPCK NIFSNMIQIS PNAKLPISPY  180
DSTNTAMAPS PRPIKPPALV SPNMVMNANT SKECLVDTTG VQISSPRNPG LKRRKNQAKK  240
VVCIPAPAAA NSRQTGEVVP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCSARKQVER  300
SRNDPNMLVI TYTSEHNHPW PTQRNALAGS TRSQPSKNNN NAAASNSKNS EGSNSQKGTA  360
TKAKDDEESN NYNNSSEGNV SPVVAGNSSN SVKEENMEDI EKHQIEMDEG EFSDGIPYKP  420
SLMDHQSTNN QQSEDFFAEL GEIEADPLDL LFTQGFGGAD DQRESKALDP FHLFDWSGNN  480
NNNNNTSSSF EEPNNKRRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-24235322280Disease resistance protein RRS1
5w3x_D2e-24235322280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN44673.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028248542.10.0probable WRKY transcription factor 14 isoform X1
RefseqXP_028248543.10.0probable WRKY transcription factor 14 isoform X1
TrEMBLA0A445IW700.0A0A445IW70_GLYSO; Putative WRKY transcription factor 14 isoform A
STRINGGLYMA09G03451.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.11e-85WRKY DNA-binding protein 14
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]