PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN43109.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 151aa    MW: 17292.8 Da    PI: 9.9474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN43109.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.48e-10128149122
                 ---SS-EEEEEEE--TT-SS-E CS
        WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                 ldDgy+WrKYGqK++  ++fpr
  KHN43109.1 128 LDDGYSWRKYGQKDILRAKFPR 149
                 59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-7120149IPR003657WRKY domain
PROSITE profilePS508119.052123151IPR003657WRKY domain
SuperFamilySSF1182905.23E-7127149IPR003657WRKY domain
PfamPF031069.6E-7129149IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MEESTKRKHT SLIHELIQGK ELTKQLSNHL VSSSPMSHQT NELFVEKILL SYEKALTMLN  60
WGSIMGEAKT TSGNIMDSHC SFTNGGSPRS EVVDRELEHK AALKKRKTMP RWTEQVKICS  120
RRGLEGSLDD GYSWRKYGQK DILRAKFPRL D
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN43109.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003554762.11e-106probable WRKY transcription factor 53
RefseqXP_028218160.11e-106probable WRKY transcription factor 53
TrEMBLA0A445FLI81e-104A0A445FLI8_GLYSO; Putative WRKY transcription factor 41
TrEMBLI1NCK21e-104I1NCK2_SOYBN; Uncharacterized protein
STRINGGLYMA19G44380.11e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3683122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-26WRKY family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]