PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KHN41611.1

Organism

Glycine soja

Taxonomic ID

3848

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 327aa MW: 36870.8 Da PI: 6.3573

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHN41611.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.4	1e-10	193	236	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + KHN41611.1 193 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 236 899*********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-13	189	253	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.358	191	243	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.7E-9	193	236	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.04E-10	193	247	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.1E-10	193	244	No hit	No description
CDD	cd14703	3.72E-21	194	244	No hit	No description
PROSITE pattern	PS00036	0	196	211	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MAQLPPKIPN MTPNWPDFSS LHQKMPSLQT TSSNQNPSWV DEILEFSVAR RGAPRRDSIT 60 FLEAPLLDHH HCKGGSVVGG GGGNNEFERF DDEQFMSMFS DEASGNNNNN NTMMAHTLSS 120 SNPSTPSDHN SINDEKEMEN KEEEEKKQLK NESEDEDKSQ CKQEITQLPN NDDSNNTSNA 180 NATCSSEKIT DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTSLQAEV SVLSPRAAFL 240 DHQRLLLNVD NSALKQRIAA LAQDKIFKDA HQEALKREIE RLRQVYHQQN IKKMDNNAAA 300 SPPSQSPSPS PKPRCETHTE KEQLINV

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHN41611.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028192806.1	0.0	basic leucine zipper 61-like
Swissprot	Q9M2K4	1e-113	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A0B2S4G7	0.0	A0A0B2S4G7_GLYSO; Putative transcription factor PosF21
STRING	GLYMA12G14130.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-107	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]