PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN39567.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 108aa    MW: 12287.7 Da    PI: 4.5694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN39567.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000444253455
                TTS-STCHHHHHHHHHHHHHHH CS
         HLH 34 pskKlsKaeiLekAveYIksLq 55
                ++ K++ +++Le A++Y+k Lq
  KHN39567.1  4 GGSKMDTVSMLECAIHYVKFLQ 25
                5789*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.401124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.54E-6228No hitNo description
SuperFamilySSF474599.42E-6249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MVPGGSKMDT VSMLECAIHY VKFLQTEILL HQALIDFVDV DHHESPLFLP AEYNNFPDEH  60
SNISLQQNPS SVSVHSHHHQ QSLPQLPLSQ CYFQGEEDFN TFDAIMPP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN39567.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025984871.11e-75transcription factor bHLH140-like
RefseqXP_028238610.11e-75transcription factor bHLH140-like
TrEMBLA0A445JX533e-74A0A445JX53_GLYSO; Transcription factor LAX PANICLE 1
TrEMBLK7L1X03e-74K7L1X0_SOYBN; Uncharacterized protein
STRINGGLYMA07G18651.15e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71672846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.11e-11APRATAXIN-like