PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN37404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 296aa MW: 33156.2 Da PI: 7.5212 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.2 | 7.6e-33 | 19 | 72 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ KHN37404.1 19 PRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.9E-31 | 15 | 74 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 10.971 | 15 | 75 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.77E-15 | 17 | 72 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.0E-23 | 19 | 72 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 9.9E-8 | 20 | 71 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MGSCGREGAV RQYVRSKVPR LRWTPELHRC FVHAIDSLGG HHKATPKLVL QLMDVKGLTI 60 SHVKSHLQMY RSMRGDLGRQ GRTPSQHRNQ SFEEHDDGCV DEVNDVGVEY SCSKPLGRES 120 DSFFGHSNLP PKRARIEMRS SISERLQQCS QRLCDVVVPN PYCFYDYLKQ KKPMPMADQH 180 SPPFPDFPNL TSFKSPDQQS DFLQVTKLNE GKSTSQTINV LVNTTTETAN VEIEDELSLS 240 LTLPNPSPQR SSGSEISEAI SSCHGFSNNY KDCSSSSTHT VKERINLDLS LALCGN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-20 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-20 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-20 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-20 | 20 | 74 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-20 | 20 | 74 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN37404.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT098225 | 0.0 | BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028183350.1 | 0.0 | uncharacterized protein LOC114370250 | ||||
TrEMBL | A0A445IU70 | 0.0 | A0A445IU70_GLYSO; Putative Myb family transcription factor | ||||
STRING | GLYMA20G24290.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5539 | 33 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 7e-36 | G2-like family protein |
Publications ? help Back to Top | |||
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