PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37094.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 305aa    MW: 34232.6 Da    PI: 7.7085
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37094.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.74.2e-22136208258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE...............EEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk...............versaedpkvveitYegeHnh 58 
                  Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkk               v+rs edp+++++tYegeHnh
  KHN37094.1 136 MDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCPVKKKlsnfsnvshhrmiiwVQRSLEDPTILVTTYEGEHNH 208
                 6***************************99******877777777777777789******************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-23128209IPR003657WRKY domain
PROSITE profilePS5081119.979130211IPR003657WRKY domain
SuperFamilySSF1182906.28E-19133210IPR003657WRKY domain
SMARTSM007743.7E-26135210IPR003657WRKY domain
PfamPF031062.2E-21137208IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEPTCGDTSL DLNVDPSTMH MDGALVEELR RLSCENKRLT HLCENYMALQ KQLSQLINTN  60
FDQQLDYPIE SSRKRKAAES DQCCTNKFVG VSNNNAECSS IITEDSFKKY KDFNSSPKVS  120
KFLVKTEASN NSLYVMDGYQ WRKYGQKVTR DNPSPRAYFR CSFAPSCPVK KKLSNFSNVS  180
HHRMIIWVQR SLEDPTILVT TYEGEHNHGH QRAEISLVSN QSEALPPLKG SSPVSSPNTA  240
TIRSAVCPTV TLDLVKSGLV EFESAQKSSI QQFLVQQMAT SLTRDPNFTT ELATAISGKI  300
LEAQW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-161352081471WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN37094.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195700.0EU019570.1 Glycine max WRKY30 (WRKY30) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601212.10.0WRKY transcription factor 30 isoform X1
RefseqXP_028209792.10.0probable WRKY transcription factor 40 isoform X1
TrEMBLA0A445GA740.0A0A445GA74_GLYSO; Putative WRKY transcription factor 40
TrEMBLK7MNC20.0K7MNC2_SOYBN; Uncharacterized protein
STRINGGLYMA17G33891.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.16e-64WRKY DNA-binding protein 40
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]