PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN36907.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 265aa    MW: 29962.5 Da    PI: 5.5904
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN36907.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.38.3e-101211632059
                 S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   +sYYrCt++   gC++ k+v+r +++p +  +tY ++H+++
  KHN36907.1 121 KRKSYYRCTHKndqGCQAIKQVQRIQDNPPLYRTTYYSHHTCK 163
                 568*******99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007741.8E-9114164IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.5E-12117165IPR003657WRKY domain
PfamPF031061.6E-11117163IPR003657WRKY domain
SuperFamilySSF1182908.37E-12118165IPR003657WRKY domain
PROSITE profilePS5081111.738123165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MENQLPNGKK ALEEELIRGH GMANQLLEVL VQDKLNTHLE EEGSSKSVLP FVEDLVRKVL  60
CSFTNTLLIL NSNNDVSNEV AASITLRDVS SSINCPKLQS VDETCKSPNI LNPKSGSGCY  120
KRKSYYRCTH KNDQGCQAIK QVQRIQDNPP LYRTTYYSHH TCKSPMNPEI IVEPFSPSAS  180
SILLSFDNNL QSKQENPFSS SILASTKHEP QEVIHNEHSA QNKLSTFENL LFYDYDIPFD  240
YSRNATLLSS TEAVQFENVY EQYGF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN36907.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028189476.10.0WRKY DNA-binding transcription factor 70-like
TrEMBLA0A445IAG60.0A0A445IAG6_GLYSO; Putative WRKY transcription factor 70
STRINGGLYMA13G34261.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126381134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.13e-20WRKY DNA-binding protein 38
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]