PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN32496.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 342aa    MW: 38664.8 Da    PI: 9.6621
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN32496.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822158.15.9e-4981169290
      DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasasp 90 
                 + gr ptwkErEnnkrRERr Raiaakiy+GLRaqGnykl k++DnneV+kALc+e Gw+ve+DGtty+kg+k+++++e+ g+ +++s 
  KHN32496.1  81 SMGRLPTWKERENNKRRERRQRAIAAKIYTGLRAQGNYKLLKHCDNNEVVKALCAEVGWIVEEDGTTYQKGCKRPSASEIEGTTTNISC 169
                 789************************************************************************9****999998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.9E-4482169IPR008540BES1/BZR1 plant transcription factor, N-terminal
SMARTSM011635.4E-12196248IPR014811Argonaute, linker 1 domain
PfamPF086998.8E-12198246IPR014811Argonaute, linker 1 domain
SuperFamilySSF1016905.49E-6220287IPR003100PAZ domain
SuperFamilySSF530984.93E-7270319IPR012337Ribonuclease H-like domain
Gene3DG3DSA:3.30.420.106.9E-5271326IPR012337Ribonuclease H-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003676Molecular Functionnucleic acid binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MQSNVHCLPA SCPFPFPFVS ASKLPPPLFS LLHLILAQER KKLQSSHKRK QISFTSFAFD  60
GRRGVETNKL RFAGTMTGGG SMGRLPTWKE RENNKRRERR QRAIAAKIYT GLRAQGNYKL  120
LKHCDNNEVV KALCAEVGWI VEEDGTTYQK GCKRPSASEI EGTTTNISCL LSFVSTFLCV  180
PVMLEYKIMS FYISCLLVRQ SFLHNDPKNF ANVGGGVIGC RGFHSSFRTT QSGLSLSIYV  240
STTMIITPGP VVDFLISNQN VRDPFSLDWA KTEVTNKCLE TYLRCFIIDQ PKTWLIWMPW  300
AEFWFNTTYH GSTGMTTFEV VYGRQPPKLV PMVQGEVRVE VV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-2484165372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-2484165372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-2484165372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-2484165372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN32496.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2354171e-154AC235417.1 Glycine max strain Williams 82 clone GM_WBb0135A07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583443.11e-127protein argonaute 4
TrEMBLA0A0B2RDI20.0A0A0B2RDI2_GLYSO; Protein argonaute 4
STRINGGLYMA14G15311.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2656023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.11e-26BES1/BZR1 homolog 2
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]