PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31770.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 494aa    MW: 54028.4 Da    PI: 8.9737
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31770.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.5e-31140199159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK+ kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+
  KHN31770.1 140 MNDGCQWRKYGQKMAKGNPCPRAYYRCTVSpSCPVRKQVQRCAEDMSILITTYEGTHNHP 199
                 58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-32125201IPR003657WRKY domain
SuperFamilySSF1182901.18E-27134201IPR003657WRKY domain
PROSITE profilePS5081128.529135201IPR003657WRKY domain
SMARTSM007741.9E-37140200IPR003657WRKY domain
PfamPF031065.1E-27141199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MGEVGEGNDN LKLSLAKLVK DSTSDEESEL VSLSLGISST GQHEMKKKKN RNEKMRENED  60
LKDILALGLD IRFDSSAIKN LSHESSCDGE RKEEELSETW PPSKVVKTIM RTRDKSEVSQ  120
HAELKKARVC IRARCDTLTM NDGCQWRKYG QKMAKGNPCP RAYYRCTVSP SCPVRKQVQR  180
CAEDMSILIT TYEGTHNHPL PTSATTIAYT TSAAASMLQS PSLSSQLGPA NSDTVPLINS  240
SVAYNLNALN FTSSSYDQQF SKSSQHLYFH NSSISTSNSH PTITLDLTSP QTSPHVGKFT  300
PGLSFIPKHS STNLHFSSST FSPLQSSMLQ SPWSPYGDCF NYEGLITQNS NQNGFLTKTG  360
KQPFQGHLYQ PNYISNRVIS QQPLPDSVVA ATKAITATPK FQSAIAAALT AYVGNGVREN  420
HVGAESAGLD LNLGGDMPYT TKKADYTSNA SRYKRMSSSA PTAPKRNLVI SQPLQASKSS  480
FGSSSLKSNQ FIDQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21127201174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014626273.10.0probable WRKY transcription factor 72
TrEMBLA0A0B2REN60.0A0A0B2REN6_GLYSO; Putative WRKY transcription factor 72
STRINGGLYMA18G16170.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.14e-50WRKY DNA-binding protein 61
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]