PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN31268.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 346aa    MW: 38940.5 Da    PI: 7.0491
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN31268.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09170217455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KHN31268.1 170 SHSLAERVRREKISERMKVLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 217
                 8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.26E-10164221No hitNo description
SuperFamilySSF474594.58E-17164233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.79166216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-16166231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-6170217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-10172222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAAFSYQYHP FLVDPAFFPN NLNTPSPPPH QFQQLPHETS SFNVTNQETS CVDQSSKITI  60
SDNEPSVTEN LSPQSSMVVD KLETGEQVTQ KVNTPVEKKR KTRNGSSLTS NPQSKDAATE  120
RKNKKQRKGN GGLKEEDKAK EEKKEQRKCP EEPPTGYIHV RARRGQATDS HSLAERVRRE  180
KISERMKVLQ RLVPGCDKVT GKALMLDEII NYVQSLQNQV EFLSMKLASV NPMFYDLATD  240
LDTLLVRPEK LNSMASPSPP LPSVSHCNSP NNQATTFADT TTMTPTNIFH IASDYLLDNS  300
VSFFLQGQRS NVFSEEDTGS HFWDAEDQRQ KFLHPCGFSN NLCSFH
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN31268.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312520.0KT031252.1 Glycine max clone HN_CCL_23 bHLH transcription factor (Glyma04g37690.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006578721.10.0transcription factor bHLH137
RefseqXP_028229482.10.0transcription factor bHLH137-like
TrEMBLA0A445L2Y60.0A0A445L2Y6_GLYSO; Transcription factor bHLH137 isoform A
TrEMBLI1JXP30.0I1JXP3_SOYBN; BHLH transcription factor
STRINGGLYMA04G37690.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-55bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]