PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN30895.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 190aa    MW: 21794.2 Da    PI: 9.819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN30895.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.3e-091868654
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
                + +E++RR +++s  ++L +l+P+ +  a+sk  l   + L +A +YIk++
  KHN30895.1 18 KTIEKNRRIHMKSLCDQLSSLIPPnLKPAKSKLmLGQRDQLDLAARYIKHM 68
                689*********************665666666899999***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.20E-61173No hitNo description
PROSITE profilePS5088810.0041268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.9E-91687IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-91686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-61868IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MKKRVASTST ESSKLDRKTI EKNRRIHMKS LCDQLSSLIP PNLKPAKSKL MLGQRDQLDL  60
AARYIKHMNE RIEKLKRQKE QVMSNNDDRK MFNNNVESKL PIVELRDLGS SIEVMLVSGL  120
NKTFMLYEVI SVLEEEGAEV VTASFSTVGD KIFYVVHAQV KISRVGVETT RAYNRLQEFI  180
APPEIWPEDV
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN30895.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028229247.11e-139transcription factor bHLH162-like
TrEMBLA0A445L1Z51e-137A0A445L1Z5_GLYSO; Transcription factor bHLH162
STRINGGLYMA04G35380.11e-136(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-27bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]