PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN29312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 348aa MW: 37741.6 Da PI: 5.9406 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.9 | 6.5e-31 | 157 | 215 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp+++++tY+ eHnh+ KHN29312.1 157 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPTMFIVTYTAEHNHP 215 79*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-30 | 149 | 217 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 34.67 | 151 | 217 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.23E-26 | 154 | 217 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-36 | 156 | 216 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-25 | 158 | 215 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence Send to blast |
MAEDWDLHAV VRGCSTVTSS SVSSSSSSSS GFASCYFHPE AAASSSSSSG FNIFKGEQGI 60 SQALSLSAYP FEARSSIEEL HELCKPFFSK SQPLTLQASS PLSSLSSYSS APPKSVSTQE 120 KQQQRSKQPH AVTTPRSKRR KNQLKKVCQV PVENLSSDIW AWRKYGQKPI KGSPYPRGYY 180 RCSSSKGCLA RKQVERNRSD PTMFIVTYTA EHNHPAPTHR NSLAGSTRQK PLAPQTATTT 240 EEDSEKSKSF TKPTSPATSG AEEEAPTPPQ GEKSESREEK EDVMDDEEED EFGLSDMVLS 300 DDFFESLDEL SQLTAPSVVT GDCFSDPFSA IAIPSWVASG AATAGGCR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-22 | 143 | 218 | 4 | 80 | Disease resistance protein RRS1 |
5w3x_D | 2e-22 | 143 | 218 | 4 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN29312.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093295 | 0.0 | BT093295.1 Soybean clone JCVI-FLGm-17I1 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003534539.1 | 0.0 | WRKY transcription factor 22 | ||||
Refseq | XP_028248358.1 | 0.0 | WRKY transcription factor 22-like | ||||
TrEMBL | A0A445J6B0 | 0.0 | A0A445J6B0_GLYSO; WRKY transcription factor 22 | ||||
TrEMBL | I1L6F6 | 0.0 | I1L6F6_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA09G39040.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4205 | 32 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-68 | WRKY family protein |
Publications ? help Back to Top | |||
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