PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN23628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | GeBP | ||||||||
Protein Properties | Length: 122aa MW: 15008.8 Da PI: 10.4549 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 100.5 | 1.4e-31 | 24 | 115 | 2 | 93 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 lfqrlw+++D lLqG++d+++++g+s +++ fy+++k +++++++k+qlveKirrLKkK+++ +k+ s+ke+sf+++hdq +fe+s+ KHN23628.1 24 LFQRLWTDDDVTELLQGFLDYTSQRGSSHDNNTALFYDQIKLRLQLDFNKNQLVEKIRRLKKKYRNVLNKICSDKEFSFKSAHDQATFEISH 115 79************************88888**********************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.2E-27 | 25 | 115 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MQVEHHDSRR KSRRRRRWDD SRRLFQRLWT DDDVTELLQG FLDYTSQRGS SHDNNTALFY 60 DQIKLRLQLD FNKNQLVEKI RRLKKKYRNV LNKICSDKEF SFKSAHDQAT FEISHNSKHY 120 NY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN23628.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235330 | 1e-111 | AC235330.1 Glycine max strain Williams 82 clone GM_WBb0082G12, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003521741.1 | 8e-56 | probable transcription factor At5g28040 | ||||
Refseq | XP_028226669.1 | 7e-56 | probable transcription factor At5g28040 | ||||
Swissprot | Q9CAV7 | 3e-41 | STKLJ_ARATH; Probable transcription factor At3g04930 | ||||
TrEMBL | A0A0B2QV26 | 2e-83 | A0A0B2QV26_GLYSO; Uncharacterized protein | ||||
STRING | GLYMA03G40520.1 | 3e-55 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3255 | 33 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 1e-40 | DNA-binding storekeeper protein-related transcriptional regulator |
Publications ? help Back to Top | |||
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